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Welcome! This is a demo for RNA pairing. (Just choose the sequence starting from 'select'. Anytime you can select another sequence, slide the value of beamsize (1-200 by step 1, 200-800 by step 100), or click on chart points. Mouse hover on graphs/charts will display values. Enjoy!)
select
Group I Intron
16S rRNA
23S rRNA
seq00: a.I1.e.S.paniceum.UNK.SSU.114 (len:210)
seq01: a.I1.e.L.dispersa.UNK.SSU.114 (len:211)
seq02: a.I1.e.L.dispersa.UNK.SSU.789 (len:218)
seq03: a.I1.e.L.dispersa.UNK.SSU.1210 (len:221)
seq04: a.I1.e.L.dispersa.UNK.SSU.287 (len:229)
seq05: a.I1.e.S.paniceum.UNK.SSU.287 (len:234)
seq06: a.I1.e.L.dispersa.UNK.SSU.1516 (len:240)
seq07: a.I1.e.S.paniceum.UNK.SSU.1052 (len:240)
seq08: a.I1.b.S.hofmanii.C3.tMET (len:251)
seq09: a.I1.e.L.dispersa.UNK.SSU.1046 (len:255)
seq10: a.I1.e.S.paniceum.UNK.SSU.1506 (len:259)
seq11: a.I1.e.S.paniceum.UNK.SSU.1210 (len:260)
seq12: a.I1.b.Synechococcus.sp2.C3.tLEU (len:265)
seq13: a.I1.e.C.merochlorophea.UNK.SSU.1389 (len:265)
seq14: a.I1.e.C.merochlorophea.UNK.SSU.1046 (len:267)
seq15: a.I1.e.C.merochlorophea.UNK.SSU.1210 (len:267)
seq16: a.I1.b.Dermocarpa.sp.ATCC29371.C3.tMET (len:268)
seq17: a.I1.b.Phormidium.sp.N182.C3.tLEU (len:270)
seq18: a.I1.e.C.merochlorophea.UNK.SSU.1516 (len:274)
seq19: a.I1.e.C.grayi.UNK.SSU.1046 (len:283)
seq20: a.I1.m.M.grisea.B2.ND1 (len:285)
seq21: a.I1.e.C.grayi.UNK.SSU.1516 (len:308)
seq22: a.I1.e.L.dispersa.UNK.SSU.516 (len:328)
seq23: a.I1.c.G.prostrata.C3.tLEU (len:336)
seq24: a.I1.m.S.pombe.B1.OX1 (len:343)
seq25: a.I1.e.P.carinii.Pc2.C1.LSU.1921 (len:355)
seq26: a.I1.e.B.ciliata.JCM6865.C1.SSU.1506 (len:357)
seq27: a.I1.e.B.ciliata.JCM6865.C1.SSU.943 (len:360)
seq28: a.I1.e.S.sclerotiorum_1837.C1.LSU.798 (len:371)
seq29: a.I1.m.S.luteus.A1.LSU.2504 (len:373)
seq30: a.I1.e.P.carinii.Pc1.C1.LSU.1921 (len:375)
seq31: a.I1.e.P.macrosporus.C1.SSU.943 (len:380)
seq32: a.I1.e.P.carinii.Pc3.C1.LSU.1921 (len:381)
seq33: a.I1.e.G.spirotaenia.C1.SSU.1506 (len:387)
seq34: a.I1.e.P.inouyei.C1.SSU.943 (len:390)
seq35: a.I1.e.P.pachydermus.C1.SSU.943 (len:392)
seq36: b.I1.e.M.anisopliae.3.C1.LSU.1921 (len:394)
seq37: a.I1.e.D.parva.C1.SSU.943 (len:396)
seq38: a.I1.e.A.capsulatus.CBS213.53.C1.SSU.943 (len:408)
seq39: a.I1.e.A.stipitatus.C1.SSU.1046 (len:408)
seq40: a.I1.e.P.inouyei.C1.SSU.1506 (len:409)
seq41: a.I1.e.Staurastrum.sp.M753.C1.SSU.1506 (len:415)
seq42: a.I1.e.D.salina.C1.SSU.943 (len:423)
seq43: a.I1.e.Staurastrum.sp.M752.C1.SSU.1506 (len:423)
seq44: a.I1.e.A.capsulatus.G184B.C1.SSU (len:425)
seq45: a.I1.e.A.capsulatus.G184B.C1.SSU (len:425)
seq46: a.I1.e.E.dermatitidis.C1.SSU.943 (len:426)
seq47: a.I1.e.A.capsulatus.FLs1.C1.SSU (len:428)
seq48: a.I1.e.U.maydis.C1.SSU.943 (len:429)
seq49: a.I1.e.P.macrosporus.C1.SSU.1506 (len:433)
seq50: a.I1.e.D.parva.C1.SSU.1512 (len:436)
seq51: a.I1.e.S.granulatum.C1.SSU.1506 (len:437)
seq52: a.I1.e.M.caldariorum.C1.SSU.1506 (len:439)
seq53: a.I1.e.P.carinii.C1.SSU.1506 (len:442)
seq54: a.I1.e.T.malaccensis.C1.LSU.1925 (len:447)
seq55: a.I1.e.C.saxonicum.C1.SSU.1506 (len:448)
seq56: a.I1.e.P.clavariiformis.C1.SSU.943 (len:448)
seq57: a.I1.e.A.adeninivorans.C1.LSU.2449 (len:450)
seq58: a.I1.e.T.cosmopolitanis.C1.LSU.1925 (len:451)
seq59: a.I1.e.T.cosmopolitanis.C1.LSU.1925 (len:451)
seq60: a.I1.e.T.pigmentosa.C1.LSU.1925 (len:451)
seq61: b.I1.e.M.anisopliae.2.C1.LSU.1921 (len:456)
seq62: a.I1.e.G.planctonica.C1.SSU.943 (len:461)
seq63: a.I1.e.B.yamatoana.JCM2896.C1.SSU.1506 (len:468)
seq64: a.I1.e.C.saccatum.C1.SSU.1512 (len:476)
seq65: a.I1.e.P.sarcinoidea.C1.SSU.943 (len:476)
seq66: a.I1.e.C.ellipsoidea.211-1a.C1.SSU.1506 (len:479)
seq67: a.I1.e.B.yamatoana.JCM2896.C1.SSU.943 (len:480)
seq68: a.I1.c.A.cherimola.C3.tLEU (len:494)
seq69: a.I1.e.C.ellipsoidea.IAMC-87.C1.SSU.1506 (len:504)
seq70: b.I1.e.T.thermophila.C1.LSU.1925 (len:506)
seq71: b.I1.e.T.thermophila.C1.LSU.1925 (len:506)
seq72: a.I1.c.S.bicolor.C3.tLEU (len:510)
seq73: a.I1.e.C.botrytis.C1.SSU.1506 (len:518)
seq74: a.I1.e.C.mirabilis.C1.SSU.1506 (len:526)
seq75: b.I1.e.A.griffini.2.C1.SSU.516 (len:526)
seq76: a.I1.c.P.thunbergii.C3.tLEU (len:550)
seq77: a.I1.c.S.alterniflora.C3.tLEU (len:554)
seq78: a.I1.c.S.alterniflora.C3.tLEU (len:554)
seq79: a.I1.c.S.maritima.C3.tLEU (len:554)
seq80: a.I1.c.S.alterniflora.C3.tLEU (len:554)
seq81: a.I1.m.S.luteus.B4.LSU.1923 (len:555)
seq82: b.I1.e.A.griffini.1.C1.SSU.516 (len:556)
seq83: a.I1.e.P.yezoensis.C1.SSU.516 (len:561)
seq84: a.I1.e.M.scalaris.C1.SSU.1506 (len:573)
seq85: a.I1.c.N.tabacum.C3.tLEU (len:575)
seq86: a.I1.e.Z.circumcarinata.C1.SSU.1506 (len:602)
seq87: b.I1.e.P.leucosticta.C1.SSU.516 (len:605)
seq88: a.I1.b.coliphage.T4.A2.NRDB (len:607)
seq89: a.I1.m.S.luteus.A1.LSU.2449 (len:611)
seq90: a.I1.m.S.luteus.B4.LSU.2500 (len:617)
seq91: a.I1.m.S.luteus.B2.LSU.1974 (len:623)
seq92: a.I1.e.C.parasitica.E.SSU.1199 (len:640)
seq93: a.I1.m.S.luteus.C2.LSU.1949 (len:646)
seq94: a.I1.m.S.luteus.C2.LSU.1685 (len:679)
seq95: a.I1.b.S.negevensis.B4.LSU.1931 (len:736)
seq00: Z.mays (len:1490)
seq01: B.subtilis (len:1552)
seq02: E.coli (len:1542)
seq03: H.volcanii (len:1474)
seq04: D.melanogaster (len:1995)
seq05: T.gondii (len:1793)
seq06: H.sapiens.mito (len:0954)
seq07: B.burgdorferi (len:1537)
seq08: A.pyrophilus (len:1564)
seq09: P.staleyi (len:1525)
seq10: C.psittaci (len:1552)
seq11: C.elegans (len:0950)
seq12: F.ananassa (len:1804)
seq13: T.maritima (len:1562)
seq14: C.reinhardtii.chloro (len:1474)
seq15: M.polymorpha (len:1974)
seq16: A.fulgidus (len:1492)
seq17: H.sapiens (len:1870)
seq18: S.cerevisiae (len:1800)
seq19: P.occultum (len:1497)
seq20: C.reinhardtii.mito (len:1200)
seq21: G.intestinalis (len:1452)
seq00: H.pylori (len:2968)
seq01: T.thermophilus (len:2915)
seq02: B.subtilis (len:2927)
seq03: S.aureus (len:2923)
seq04: E.coli (len:2904)
Sequence to be demostrated: Not selected
Slide to adjust the beam size:
1
100
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